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Projects / Programmes source: ARIS

Gynecology and Reproduction: Genomics and Stem Cells

Periods
Research activity

Code Science Field Subfield
3.05.00  Medical sciences  Human reproduction   

Code Science Field
B000  Biomedical sciences   

Code Science Field
3.02  Medical and Health Sciences  Clinical medicine 
Keywords
genome medicine, gynaecology and reproduction, personalised medicine, next generation sequencing, stem cells, microbiom
Evaluation (metodology)
source: COBISS
Organisations (2) , Researchers (42)
0312  University Medical Centre Ljubljana
no. Code Name and surname Research area Role Period No. of publicationsNo. of publications
1.  53392  PhD Ivana Babić Božović  Human reproduction  Researcher  2019  63 
2.  21364  PhD Helena Ban Frangež  Human reproduction  Researcher  2015 - 2019  215 
3.  13314  PhD Matija Barbič  Human reproduction  Researcher  2018 - 2019  179 
4.  28897  Tamara Bertoncelj    Technical associate  2015 - 2019 
5.  30421  PhD Mija Blaganje  Human reproduction  Researcher  2015 - 2019  220 
6.  33343  PhD Tanja Burnik Papler  Human reproduction  Researcher  2015 - 2019  64 
7.  32106  PhD Barbara Golob  Human reproduction  Researcher  2015 - 2019  19 
8.  38272  PhD Keli Hočevar  Human reproduction  Young researcher  2015 - 2019  19 
9.  36869  PhD Alenka Hodžić  Human reproduction  Researcher  2015 - 2019  48 
10.  26061  PhD Helena Jaklič  Human reproduction  Researcher  2015 - 2019  41 
11.  36940  Anita Jančar    Technical associate  2015 - 2019 
12.  25612  PhD Nina Jančar  Human reproduction  Researcher  2015 - 2019  144 
13.  37651  Esada Kerić    Technical associate  2019 
14.  33341  PhD Katja Knez  Medical sciences  Young researcher  2015 
15.  06970  PhD Borut Kobal  Human reproduction  Researcher  2018 - 2019  439 
16.  50624  PhD Urška Kotnik  Biochemistry and molecular biology  Young researcher  2017 - 2019  22 
17.  30697  PhD Anja Kovanda  Neurobiology  Researcher  2017 - 2019  85 
18.  29685  Tina Likar  Medical sciences  Young researcher  2015 - 2016 
19.  23434  PhD Luca Lovrečić  Human reproduction  Researcher  2015 - 2019  178 
20.  06171  PhD Adolf Lukanovič  Human reproduction  Researcher  2015 - 2019  786 
21.  34579  PhD Aleš Maver  Human reproduction  Researcher  2015 - 2019  246 
22.  17644  Jožica Mivšek    Technical associate  2015 - 2019  65 
23.  31217  Iryna Nikolayeva    Technical associate  2015 - 2019 
24.  23818  PhD Tadej Pajič  Human reproduction  Researcher  2019  190 
25.  53979  Simona Petač    Technical associate  2019 
26.  10458  PhD Borut Peterlin  Human reproduction  Head  2015 - 2019  915 
27.  15416  PhD Barbara Požlep  Human reproduction  Researcher  2015 - 2019  72 
28.  28621  Bernarda Prosenc  Human reproduction  Technical associate  2015 - 2019  12 
29.  22501  PhD Mihael Rogač  Human reproduction  Researcher  2015 - 2019  55 
30.  21362  PhD Špela Smrkolj  Human reproduction  Researcher  2015 - 2019  327 
31.  23076  Andrej Stegnar    Technical associate  2015 - 2019 
32.  36428  PhD Lovro Vidmar  Biochemistry and molecular biology  Young researcher  2015 - 2018  15 
33.  32009  PhD Tanja Višnjar  Human reproduction  Researcher  2019  48 
34.  12177  PhD Eda Vrtačnik-Bokal  Human reproduction  Researcher  2015 - 2019  605 
35.  20257  PhD Karin Writzl  Human reproduction  Researcher  2015 - 2019  238 
36.  53977  Ana Nyasha Zimani  Human reproduction  Technical associate  2019  12 
37.  19449  PhD Branko Zorn  Human reproduction  Researcher  2015 - 2018  308 
0381  University of Ljubljana, Faculty of Medicine
no. Code Name and surname Research area Role Period No. of publicationsNo. of publications
1.  28348  PhD Ines Cilenšek  Cardiovascular system  Technical associate  2015 - 2019  49 
2.  30148  Marjeta Kuhar    Technical associate  2016 - 2019 
3.  26230  Petra Nussdorfer    Technical associate  2015  14 
4.  53254  Ana Marija Peterlin  Cardiovascular system  Technical associate  2019  30 
5.  11252  PhD Danijel Petrovič  Cardiovascular system  Researcher  2015 - 2019  327 
Abstract
The basic premise of the program is that the results of genomic and other “omic” technologies, their integration, as well as stem cell technology can contribute significant new insights into the understanding, diagnosis, prevention and treatment of human disease. The program aims to use state of the art genomic methodologies, including Next Generation Sequencing (for the purpose of exome / genome sequencing), global transcriptomic and epigenetic analysis, microbiome analysis and stem cell technology, in order to further our knowledge in the fields of etiology and the mechanisms of selected pathologic states in gynecology and obstetrics such as gynecological cancer (i.e. breast cancer, ovarian cancer and other cancer syndromes which affect reproductive organs), endometriosis, male infertility and preterm birth. With the development of new algorithms for clinical interpretation of genomic data we will contribute to bridging the gap in translating next generation sequencing methods to clinical diagnostics. We will use new genomic methods to develop innovative, noninvasive methods of prenatal screening for aneuploidies and genetic diagnostics of monogenic disease, and also for the purpose of preimplantational genetic diagnosis. In this context we will be contributing to the development of methods for primary prevention of genetic disease. With the help of global genomic analysis (NGS, transcriptomics), we will provide new understanding of the processes involved in successful natural and assisted reproduction. Using analysis and integration of personal genomic information (exome / genome sequences, familiy history provided on the basis of a studied illness or familial disease), personal exposome (information about environmental risk factors) and microbiome data (profiling done based on next generation sequencing) we aim to develop predictive models that will contribute to bettering the development of personalized medicine, as well as translating our findings of basic biomedical research into clinical practice. In the proposed program we intend to continue transferring innovative, pioneering treatment using stem cells in the field of urinary incontinence in every day clinical practice. By acquiring original scientific knowledge we will not only contribute to the development of the gynecological and obstetric professions and genomic medicine, but we will also further the improvement of new scientific services in the previously mentioned fields, and contribute to the education of research and clinical personnel. In this way, we aim to help to improve our National Health System and with that the health and quality of life of the general population.
Significance for science
Using innovative state of the art genomic methodologies, including Next Generation Sequencing (for the purpose of exome / genome sequencing), we plan to contribute to our knowledge in the fields of etiology and the mechanisms of selected pathologic states in gynecology and obstetrics such as gynecological cancer (i.e. breast cancer, ovarian cancer and other cancer syndromes which affect reproductive organs), endometriosis, male infertility and preterm birth as well as contribute new approaches to primary prevention of genetic disorders and improve success of assisted reproduction. With the development of new algorithms for clinical interpretation of genomic data we will contribute to bridging the gap in translating next generation sequencing methods to clinical diagnostics. Using analysis and integration of personal genomic information (exome / genome sequences, family history provided on the basis of a studied illness or familial disease), personal exposome (information about environmental risk factors) and microbiome data (profiling done based on next generation sequencing) we aim to develop predictive models that will contribute to bettering the development of personalized medicine, as well as translating our findings of basic biomedical research into clinical practice. In the proposed program we also intend to continue transferring innovative, pioneering treatment using stem cells in the field of urinary incontinence in every day clinical practice.
Significance for the country
By acquiring original scientific knowledge we will not only contribute to the development of the gynecological and obstetric professions and genomic medicine, but we will also contribute to the education of research and clinical personnel. In this way, we aim to help to improve our National Health System and with that the health and quality of life of the general population.
Most important scientific results Annual report 2015, interim report, final report
Most important socioeconomically and culturally relevant results Annual report 2015, interim report, final report
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