Loading...
Projects / Programmes source: ARIS

Quantitative volumetric microscopy for label-free characterization of emulsion droplets and liquid crystals in microfluidic environments

Research activity

Code Science Field Subfield
2.21.00  Engineering sciences and technologies  Technology driven physics   

Code Science Field
1.03  Natural Sciences  Physical sciences 
Keywords
Droplet microfluidics, volumetric microscopy, liquid crystals, emulsions, light sensing, light propagation, inverse modelling, label-free, lens-less computational imaging, neural networks, deep learning.
Evaluation (metodology)
source: COBISS
Points
3,994.54
A''
490.83
A'
1,726.17
A1/2
2,179.64
CI10
7,945
CImax
532
h10
41
A1
13.62
A3
2.72
Data for the last 5 years (citations for the last 10 years) on October 15, 2025; Data for score A3 calculation refer to period 2020-2024
Data for ARIS tenders ( 04.04.2019 – Programme tender, archive )
Database Linked records Citations Pure citations Average pure citations
WoS  336  8,343  7,335  21.83 
Scopus  428  10,564  9,288  21.7 
Organisations (2) , Researchers (13)
0381  University of Ljubljana, Faculty of Medicine
no. Code Name and surname Research area Role Period No. of publicationsNo. of publications
1.  18326  PhD Jure Derganc  Neurobiology  Researcher  2023 - 2025  126 
2.  54463  Rok Štanc  Physics  Young researcher  2023 - 2025  16 
3.  26467  PhD Uroš Tkalec  Physics  Head  2023 - 2025  225 
4.  30998  Marko Tuljak    Technical associate  2023 - 2025 
1538  University of Ljubljana, Faculty of Electrical Engineering
no. Code Name and surname Research area Role Period No. of publicationsNo. of publications
1.  53941  PhD Žiga Bizjak  Systems and cybernetics  Researcher  2023  29 
2.  25528  PhD Miran Burmen  Systems and cybernetics  Researcher  2023 - 2025  115 
3.  15678  PhD Boštjan Likar  Systems and cybernetics  Researcher  2023 - 2025  381 
4.  38161  PhD Ana Marin  Systems and cybernetics  Researcher  2023 - 2024  37 
5.  36457  PhD Peter Naglič  Systems and cybernetics  Researcher  2023 - 2024  57 
6.  06857  PhD Franjo Pernuš  Systems and cybernetics  Researcher  2023 - 2025  520 
7.  55680  Domen Preložnik  Computer science and informatics  Researcher  2023 - 2024 
8.  28465  PhD Žiga Špiclin  Systems and cybernetics  Researcher  2023 - 2025  159 
9.  23404  PhD Tomaž Vrtovec  Systems and cybernetics  Researcher  2023 - 2025  221 
Abstract
Interplay between emulsion droplets and liquid crystals in microfluidic environments provides a unique platform for research of unexplored phenomena in soft matter, enabling detection of chemical compounds and biological structures, which is expected to provide solutions to various biological and health related problems. On the one hand, emulsion droplets act as microreactors, offering low sample consumption, enhanced control over mass or heat transport, monodispersity, high-throughput analysis, compartmentalization of chemical reactions, and prevention of sample contamination. On the other hand, liquid crystals exhibit properties of anisotropic fluids with long-range orientational order of the constituent molecules, and represent highly responsive materials that react to external fields and chemical gradients in the surrounding media. Quantitative characterization is key to understanding the underlying physics and chemistry of the phenomena involving emulsion droplets and liquid crystals. Such characterization is currently accomplished by various optical microscopy techniques using polarized light, fluorescence, stimulated emission depletion, and Raman scattering. These techniques lack volumetric information, require fluorescent labeling, and have low time efficiency. Therefore, the introduction of a new microscopy technique that enables time-efficient, label-free, and quantitative volumetric characterization of dynamic processes involving emulsion droplets and liquid crystals in microfluidic environments is of paramount importance. Ideally suited for this task is digital holographic microscopy, which is based on the digital recording of an interference pattern (a hologram) between the reference light wave and the scattered light wave emitted by microscopic objects. The recorded hologram can be reconstructed computationally into quantitative volumetric information including the morphology and three-dimensional refractive index distribution of the microscopic objects. The refractive index distribution reveals general structure of the objects, local variations in molecular concentration and their orientation, quantitative information about mass transport, and even optical birefringence. This information could prove pivotal in the field of emulsions and liquid crystals in microfluidic environments, making it an important research topic. The goal of the proposed research project is to conceive and promote novel quantitative volumetric and label-free methods based on digital holographic microscopy to characterize the morphology and three-dimensional refractive index distribution of microfluidic droplets and liquid crystal emulsions. The main objectives of the proposed research are: 1) development of analytical and numerical models for light scattering and propagation through emulsion droplets, liquid crystals and optical elements, 2) development of inverse models and reconstruction algorithms to determine the morphology and three-dimensional refractive index distribution of emulsion droplets and liquid crystals, 3) experimental realization of several digital holographic microscopy configurations based on on-axis and off-axis light path systems in transmission and reflection modes, 4) establishment of a reference standard for emulsion droplets for critical evaluation and comparison of models and experimental configurations, 5) time-efficient improvement of inverse models, reconstruction algorithms, and digital holographic microscopy configurations, and finally 6) characterization of dynamic processes and phenomena involving emulsion droplets and liquid crystals in microfluidic environments. We anticipate that realization of the proposed methods will not only provide novel quantitative volumetric and label-free technologies for characterization of emulsion droplets and liquid crystals but also open new avenues for use in interdisciplinary sciences and industry, where current detection methods are considered inadequate.
Views history
Favourite